Package: sccca
Type: Package
Title: Single-Cell Correlation Based Cell Type Annotation
Version: 0.1.1
Authors@R: c(person("Mohamed", "Soudy", email = "Mohmedsoudy2009@gmail.com", role=c("aut", "cre")), person("Sophie", "LE BARS", email = "sophie.lebars@uni.lu", role = "aut"), person("Enrico", "Glaab", email = "enrico.glaab@uni.lu", role = "aut"))
Maintainer: Mohamed Soudy <Mohmedsoudy2009@gmail.com>
Description: Performing cell type annotation based on cell markers from
        a unified database. The approach utilizes correlation-based
        approach combined with association analysis using Fisher-exact
        and phyper statistical tests (Upton, Graham JG. (1992)
        <DOI:10.2307/2982890>).
License: GPL (>= 3)
Encoding: UTF-8
Imports: Seurat, dplyr, plyr, scales, HGNChelper, openxlsx
RoxygenNote: 7.3.0
NeedsCompilation: no
Packaged: 2026-10-11 10:11:15 UTC; root
Author: Mohamed Soudy [aut, cre], Sophie LE BARS [aut], Enrico Glaab
        [aut]
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 zlib1g-dev
Repository: https://mohmedsoudy.r-universe.dev
Date/Publication: 2024-03-14 02:30:58 UTC
RemoteUrl: https://github.com/cran/sccca
RemoteRef: HEAD
RemoteSha: bb077ac514b0b623f595e102bd62c9b21a6e95c9