Package: DFD 0.1.0

DFD: Extract Drugs from Differential Expression Data

Extract Drugs from Differential Expression Data using the Connectivity Map (CMAP) Approach and Library of Integrated Network-Based Cellular Signatures (LINCS) Database.

Authors:Mohamed Soudy [aut, cre]

DFD_0.1.0.tar.gz
DFD_0.1.0.zip(r-4.7)DFD_0.1.0.zip(r-4.6)DFD_0.1.0.zip(r-4.5)
DFD_0.1.0.tgz(r-4.6-any)DFD_0.1.0.tgz(r-4.5-any)
DFD_0.1.0.tar.gz(r-4.7-any)DFD_0.1.0.tar.gz(r-4.6-any)
DFD_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
DFD/json (API)

# Install 'DFD' in R:
install.packages('DFD', repos = c('https://mohmedsoudy.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mohmedsoudy/dfd/issues

On CRAN:

Conda:

3.00 score 2 stars 1 scripts 497 downloads 6 exports 154 dependencies

Last updated from:d9b4a857c7. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE457
source / vignettesOK382
linux-release-x86_64NOTE432
macos-release-arm64NOTE277
macos-oldrel-arm64NOTE296
windows-develNOTE420
windows-releaseNOTE388
windows-oldrelNOTE380
wasm-releaseOK275

Exports:convert_idfilter_drugsget_drugsprepare_idsread_idrun_pipeline

Dependencies:abindaffyaffyioannotateAnnotationDbiAnnotationHubaskpassbase64encBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsbiocmakeBiocManagerBiocParallelBiocVersionBiostringsbitbit64bitopsblobbslibcachemclicliprcodetoolscowplotcpp11crayoncrosstalkcurldata.tableDBIdbplyrDelayedArraydigestdir.expiryDOSEdplyrenrichitevaluateExperimentHubfarverfastmapfastmatchfgseafilelockfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomicRangesggplot2glueGO.dbGOSemSimgprofiler2graphgridExtraGSEABasegtableh5mreadHDF5Arrayhighrhmshtmltoolshtmlwidgetshttrhttr2IRangesisobandjquerylibjsonliteKEGGRESTknitrlabelinglambda.rlaterlatticelazyevallifecyclelimmamagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslorg.Hs.eg.dbotelpillarpkgconfigplotlyplyrpngpreprocessCoreprettyunitsprogresspromisespurrrqvalueR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRCurlreactome.dbreadrreshape2rhdf5rhdf5filtersRhdf5librlangrmarkdownRSQLiteS4ArraysS4VectorsS7sassscalesSeqinfosignatureSearchsignatureSearchDatasnowSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttinytextzdbutf8vctrsviridisLitevisNetworkvroomwithrxfunXMLxtableXVectoryamlyulab.utils