Package: ggaligner 0.1
ggaligner: Visualizing Sequence Alignment by Generating Publication-Ready Plots
Providing publication-ready graphs for Multiple sequence alignment. Moreover, it provides a unique solution for visualizing the multiple sequence alignment without the need to do the alignment in each run which is a big limitation in other available packages.
Authors:
ggaligner_0.1.tar.gz
ggaligner_0.1.zip(r-4.5)ggaligner_0.1.zip(r-4.4)ggaligner_0.1.zip(r-4.3)
ggaligner_0.1.tgz(r-4.4-any)ggaligner_0.1.tgz(r-4.3-any)
ggaligner_0.1.tar.gz(r-4.5-noble)ggaligner_0.1.tar.gz(r-4.4-noble)
ggaligner_0.1.tgz(r-4.4-emscripten)ggaligner_0.1.tgz(r-4.3-emscripten)
ggaligner.pdf |ggaligner.html✨
ggaligner/json (API)
# Install 'ggaligner' in R: |
install.packages('ggaligner', repos = c('https://mohmedsoudy.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mohmedsoudy/ggaligner/issues
Last updated 1 years agofrom:16ce3275b0. Checks:OK: 6 WARNING: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 02 2024 |
R-4.5-win | OK | Nov 02 2024 |
R-4.5-linux | WARNING | Nov 02 2024 |
R-4.4-win | OK | Nov 02 2024 |
R-4.4-mac | OK | Nov 02 2024 |
R-4.3-win | OK | Nov 02 2024 |
R-4.3-mac | OK | Nov 02 2024 |
Dependencies:apeaplotashaskpassbase64encBiocGenericsBiostringsbslibcachemclicolorspacecpp11crayoncrosstalkcurldata.tabledigestdplyrevaluateextrafontextrafontdbfansifarverfastmapfontawesomefsgenericsGenomeInfoDbGenomeInfoDbDataggaltggforceggfunggmsaggplot2ggplotifyggtreegluegridGraphicsgtablehighrhtmltoolshtmlwidgetshttrIRangesisobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevallifecyclemagrittrmapsMASSMatrixmemoisemgcvmimemunsellnlmeopensslpatchworkpillarpkgconfigplotlyplyrpolyclipproj4promisespurrrR4RNAR6rappdirsRColorBrewerRcppRcppEigenreshape2rlangrmarkdownRttf2pt1S4VectorssassscalesseqmagickstatebinsstringistringrsyssystemfontstibbletidyrtidyselecttidytreetinytextreeiotweenrUCSC.utilsutf8vctrsviridisLitewithrxfunXVectoryamlyulab.utilszlibbioc
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Visualize the alignment object from msa package | ggaligner |
Convert string to a character vector | Seqtochar |